Target | Primer or probe | Nucleotide sequence (5′ to 3′) | Final concentration (nmol) |
pmpH | Forward primer | GGATAACTCTGTGGGGTATTCTCCT | 600 |
pmpH | Reverse primer | AGACCCTTTCCGAGCATCACT | 600 |
pmpH | LGV-specific probe | VIC-CCTGCTCCAACAGT–MGB | 200 |
pmpH | Non-LGV specific probe | FAM-GCTTGAAGCAGCAGGAGCTGGTG–BHQ | 200 |
Plasmid | Forward primer | GGATTGACTCCGACAACGTATTC | 50 |
Plasmid | Reverse primer | ATCATTGCCATTAGAAAGGGCATT | 100 |
Plasmid | Probe | CalRed610–TTACGTGTAGGCGGTTTAGAAAGCGG–BHQ | 100 |
RNase P | Forward primer | CCAAGTGTGAGGGCTGAAAAG | 80 |
RNase P | Reverse primer | TGTTGTGGCTGATGAACTATAAAAGG | 80 |
RNase P | Probe | CY5–CCCCAGTCTCTGTCAGCACTCCCTTC–BHQ | 80 |
LGV, lymphogranuloma venereum.