Summary of specimens providing discrepant results. Cycle threshold (Ct) values are provided in parentheses where available
| Specimen identifier | Specimen type | Original results: cobas 4800 | Reference | Retesting results assays (C trachomatis only): | |
| cobas 4800 | Reference | ||||
| C trachomatis discrepant specimens: | |||||
| A | Urine | Neg | Pos (NA) | Pos (36) | Pos (37) |
| B | Urine | Neg | Pos (41) | Neg | Neg |
| C | Urine | Neg | Pos (43) | Neg | Neg |
| D | Urine | Neg | Pos (42) | Neg | Neg |
| E | Urine | Neg | Pos (43) | Neg | Neg |
| F | Urine | Pos (36) | Neg | Pos (36) | Pos (NA) |
| G | Urine | Pos (36) | Neg | Pos (36) | Pos (NA) |
| H | Vaginal swab | Neg | Pos (NA) | Neg* | Neg* |
| I | Vaginal swab | Neg | Pos (NA) | Neg* | Neg* |
| N gonorrhoeae discrepant specimens: | |||||
| J | Urine | Neg | Pos: AMP Pos; NG duplex - opa Pos (39), porA neg | ||
| K | Vaginal swab | Pos (39) | Neg: AMP Pos; porALC neg | ||
↵* The original phosphate-buffered saline suspension of these swabs was not available, therefore the remaining cobas PCR media suspensions of these specimens were used for retesting.
AMP, Roche AMPLICOR assay; NA, not available; Neg, Negative; porALC, porA LightCycler assay; Pos, positive.