Distribution of MLST profiles and C trachomatis ompA genotypes in 31 clinical isolates from 2006, excluding the genotype E isolates described in table 1
| MLST profile | ompA | GenBank reference sequence | |||||
| Isolate No | hctB | CT058 | CT144 | CT172 | pbpB | ||
| 4799 | 11 | 7 | 12 | 3 | 18 | B | FJ261925 |
| 4831 | 11 | 7 | 12 | 3 | 18 | B | FJ261925 |
| 3743 | 5 | 19 | 7 | 1 | 4 | D | X62920 |
| 3983 | 5 | 19 | 7 | 1 | 4 | D | X62920 |
| 4338 | 5 | 19 | 7 | 1 | 4 | D | X62920 |
| 4475 | 5 | 19 | 7 | 1 | 4 | D | X62920 |
| 4667 | 10 | 4 | 1 | 3 | 23 | D/B120 | X62918 |
| 4822 | 10 | 4 | 1 | 3 | 23 | D/B120 | X62918 |
| 4266 | 10 | 17 | 1 | 4 | 23 | D/B185 | X62919 |
| 3875 | 5 | 19 | 15 | 1 | 4 | F | X52080 |
| 4020 | 5 | 19 | 15 | 1 | 4 | F | X52080 |
| 4263 | 5 | 19 | 7 | 1 | 46 | F | X52080 |
| 3888 | 5 | 19 | 7 | 1 | 4 | F | X52080 |
| 4406 | 5 | 19 | 7 | 1 | 4 | F | X52080 |
| 4558 | 5 | 19 | 7 | 1 | 4 | F | X52080 |
| 3731 | 43 | 19 | 7 | 9 | 4 | F | X52080 |
| 4923 | NT* | 19 | 7 | 3 | 4 | F | X52080 |
| 4049 | 10 | 4 | 1 | 3 | 5 | G | AF063199† |
| 4410 | 10 | 4 | 1 | 7 | 12 | G | AF063199‡ |
| 3616 | 10 | 8 | 1 | 4 | 5 | G | AF063199† |
| 4083 | 10 | 35 | 5 | 3 | 6 | G | AF063199† |
| 4796 | 10 | 36 | 22 | 4 | 6 | G | AF063199† |
| 3532 | 20 | 21 | 5 | 3 | 6 | G | AF063199† |
| 3656 | 12 | 12 | 11 | 9 | 21 | H | X16007§ |
| 4500 | 10 | 5 | 12 | 3 | 18 | Ia | AF063201 |
| 4376 | 10 | 5 | 12 | 7 | 18 | J | AF063202 |
| 4416 | 10 | 5 | 12 | 4 | 18 | J | AF063202 |
| 4368 | 10 | 7 | 9 | 1 | 8 | K | AF063204 |
| 3813 | 10 | 7 | 9 | 3 | 8 | K | AF063204 |
| 4760 | 10 | 7 | 9 | 3 | 8 | K | AF063204 |
| 3536 | 42 | 4 | 1 | 7 | 44 | K | AF063204 |
↵* NT, Not typeable.
↵† Genotype G with one mutation (T→G in position 1003) compared to AF063199 in GenBank.
↵‡ Genotype G with four mutations (T→A in position 228, G→A in position 487, G→C in position 700 and T→A in position 1003) compared with AF063199 in GenBank.
↵§ Genotype H with two mutations (A→G in position 440 and C→T in position 1018) compared with X16007 in GenBank.
MLST, multilocus sequence typing.