Positive tests among the 99 specimens subjected to point of care multiplex PCR using the filmarray device
| Specimen type | |||||||
| Detected organism | Urine N=44 | Urethral N=5 | Cervical N=7 | Rectal N=16 | Oral N=20 | Ulcer N=7 | Total |
| Neisseria gonorrhoeae | 4 | 2 | 2 | 2 | 10 | ||
| Chlamydia trachomatis | 7 | 2 | 3 | 12 | |||
| Treponema pallidum | 1 | 1 | 1 | 1 | 4 | ||
| Trichomonas vaginalis | 1 | 2 | 3 | ||||
| HSV-1 | 2 | 2 | |||||
| HSV-2 | 0 | ||||||
| Mycoplasma genitalium | 3 | 3 | |||||
| Ureaplasma spp. | 17 | 1 | 3 | 4 | 2 | 1 | 28 |
| Haemophilus ducreyi | 0 | ||||||