Top-down systems biology modeling of host metabotype− microbiome associations in obese rodents

A Waldram, E Holmes, Y Wang… - Journal of proteome …, 2009 - ACS Publications
Covariation in the structural composition of the gut microbiome and the spectroscopically
derived metabolic phenotype (metabotype) of a rodent model for obesity were investigated …

[HTML][HTML] Whole-genome sequencing to determine transmission of Neisseria gonorrhoeae: an observational study

…, J Dave, DR Thomas, K Foster, A Waldram… - The Lancet Infectious …, 2016 - thelancet.com
Background New approaches are urgently required to address increasing rates of
gonorrhoea and the emergence and global spread of antibiotic-resistant Neisseria …

Whole genome sequencing reveals an outbreak of Salmonella Enteritidis associated with reptile feeder mice in the United Kingdom, 2012-2015

S Kanagarajah, A Waldram, G Dolan, C Jenkins… - Food …, 2018 - Elsevier
Abstract Analysis of whole genome sequencing data uncovered a previously undetected
outbreak of Salmonella Enteritidis that had been on-going for four years. Cases were …

[HTML][HTML] Prevalence of Giardia infection in households of Giardia cases and risk factors for household transmission

A Waldram, R Vivancos, C Hartley, K Lamden - BMC infectious diseases, 2017 - Springer
Background Giardia is a leading but neglected cause of infectious gastroenteritis worldwide
and is treatable. There is a substantial burden of undetected Giardia in the UK and for every …

Epidemiological analysis of Salmonella clusters identified by whole genome sequencing, England and Wales 2014

A Waldram, G Dolan, PM Ashton, C Jenkins… - Food …, 2018 - Elsevier
The unprecedented level of bacterial strain discrimination provided by whole genome
sequencing (WGS) presents new challenges with respect to the utility and interpretation of …

Control selection methods in recent case–control studies conducted as part of infectious disease outbreaks

A Waldram, C McKerr, M Gobin, G Adak… - European journal of …, 2015 - Springer
Successful investigation of national outbreaks of communicable disease relies on rapid
identification of the source. Case–control methodologies are commonly used to achieve this …

Large outbreak of multiple gastrointestinal pathogens associated with fresh curry leaves in North East England, 2013

A Waldram, J Lawler, C Jenkins, J Collins… - Epidemiology & …, 2018 - cambridge.org
A total of 592 people reported gastrointestinal illness following attendance at Street Spice, a
food festival held in Newcastle-upon-Tyne, North East England in February/March 2013 …

Selection of population controls for a Salmonella case-control study in the UK using a market research panel and web-survey provides time and resource savings

…, H Maguire, GK Adak, G Dabrera, A Waldram… - Epidemiology & …, 2016 - cambridge.org
Timely recruitment of population controls in infectious disease outbreak investigations is
challenging. We evaluated the timeliness and cost of using a market research panel as a …

How to do it: lessons identified from investigating and trying to control an outbreak of gonorrhoea in young heterosexual adults

…, G Hughes, I Simms, C Ison, A Waldram - Sexually Transmitted …, 2016 - sti.bmj.com
Background In the early summer of 2011, clinicians at Northumberland Sexual Health clinic
noticed a sustained increase in cases of gonorrhoea and, more noticeably, a change in case …

An ongoing outbreak of heterosexually-acquired syphilis across Teesside, UK

…, S Tayal, E Thody, A Waldram… - … journal of STD & …, 2011 - journals.sagepub.com
Prior to 2006, diagnoses of heterosexually acquired syphilis were rare in Teesside (an area
in the north east of England, UK). Since 2006, there has been an increase in such cases …